Ongoing evolution of swine influenza viruses: a novel reassortant.
Identifieur interne : 000445 ( Main/Exploration ); précédent : 000444; suivant : 000446Ongoing evolution of swine influenza viruses: a novel reassortant.
Auteurs : Roland Zell [Allemagne] ; Silke Bergmann ; Andi Krumbholz ; Peter Wutzler ; Ralf DürrwaldSource :
- Archives of virology [ 1432-8798 ] ; 2008.
Descripteurs français
- KwdFr :
- Allemagne (MeSH), Animaux (MeSH), Anticorps antiviraux (sang), Données de séquences moléculaires (MeSH), Infections à Orthomyxoviridae (immunologie), Infections à Orthomyxoviridae (médecine vétérinaire), Infections à Orthomyxoviridae (virologie), Maladies des porcs (virologie), Phylogenèse (MeSH), Sous-type H3N2 du virus de la grippe A (classification), Sous-type H3N2 du virus de la grippe A (génétique), Sous-type H3N2 du virus de la grippe A (immunologie), Sous-type H3N2 du virus de la grippe A (isolement et purification), Suidae (MeSH), Tests d'inhibition de l'hémagglutination (MeSH), Virus recombinants (classification), Virus recombinants (génétique), Virus recombinants (immunologie), Virus recombinants (isolement et purification), Évolution moléculaire (MeSH).
- MESH :
- génétique : Sous-type H3N2 du virus de la grippe A, Virus recombinants.
- immunologie : Infections à Orthomyxoviridae, Sous-type H3N2 du virus de la grippe A, Virus recombinants.
- isolement et purification : Sous-type H3N2 du virus de la grippe A, Virus recombinants.
- médecine vétérinaire : Infections à Orthomyxoviridae.
- sang : Anticorps antiviraux, Sous-type H3N2 du virus de la grippe A, Virus recombinants.
- virologie : Infections à Orthomyxoviridae, Maladies des porcs.
- Allemagne, Animaux, Données de séquences moléculaires, Phylogenèse, Suidae, Tests d'inhibition de l'hémagglutination, Évolution moléculaire.
- Wicri :
- geographic : Allemagne.
English descriptors
- KwdEn :
- Animals (MeSH), Antibodies, Viral (blood), Evolution, Molecular (MeSH), Germany (MeSH), Hemagglutination Inhibition Tests (MeSH), Influenza A Virus, H3N2 Subtype (classification), Influenza A Virus, H3N2 Subtype (genetics), Influenza A Virus, H3N2 Subtype (immunology), Influenza A Virus, H3N2 Subtype (isolation & purification), Molecular Sequence Data (MeSH), Orthomyxoviridae Infections (immunology), Orthomyxoviridae Infections (veterinary), Orthomyxoviridae Infections (virology), Phylogeny (MeSH), Reassortant Viruses (classification), Reassortant Viruses (genetics), Reassortant Viruses (immunology), Reassortant Viruses (isolation & purification), Swine (MeSH), Swine Diseases (virology).
- MESH :
- chemical , blood : Antibodies, Viral.
- geographic : Germany.
- classification : Influenza A Virus, H3N2 Subtype, Reassortant Viruses.
- genetics : Influenza A Virus, H3N2 Subtype, Reassortant Viruses.
- immunology : Influenza A Virus, H3N2 Subtype, Orthomyxoviridae Infections, Reassortant Viruses.
- isolation & purification : Influenza A Virus, H3N2 Subtype, Reassortant Viruses.
- veterinary : Orthomyxoviridae Infections.
- virology : Orthomyxoviridae Infections, Swine Diseases.
- Animals, Evolution, Molecular, Hemagglutination Inhibition Tests, Molecular Sequence Data, Phylogeny, Swine.
Abstract
A novel H3N2 influenza virus strain isolated in Germany from pigs with clinical symptoms of influenza is described. It was characterised by neutralisation test, hemagglutination inhibition test and complete sequencing of the genome. The data demonstrate the emergence of a H3N2 reassortant with the human-like HAH3 gene of prevalent European porcine H3N2 influenza viruses and a NAN2 gene of the European porcine H1N2 viruses. The gene segments of the internal proteins are avian-like, consistent with European porcine influenza viruses. Analysis of GenBank sequence data reveals numerous reassortment events in recent years, demonstrating ongoing evolution of swine influenza viruses.
DOI: 10.1007/s00705-008-0244-1
PubMed: 18985274
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Ongoing evolution of swine influenza viruses: a novel reassortant.</title><author><name sortKey="Zell, Roland" sort="Zell, Roland" uniqKey="Zell R" first="Roland" last="Zell">Roland Zell</name><affiliation wicri:level="1"><nlm:affiliation>Institut für Virologie und Antivirale Therapie, Universitätsklinikum, Friedrich Schiller Universität, Hans-Knöll-Str. 2, 07745, Jena, Germany. Roland.Zell@med.uni-jena.de</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institut für Virologie und Antivirale Therapie, Universitätsklinikum, Friedrich Schiller Universität, Hans-Knöll-Str. 2, 07745, Jena</wicri:regionArea><wicri:noRegion>07745, Jena</wicri:noRegion><wicri:noRegion>07745, Jena</wicri:noRegion><wicri:noRegion>Jena</wicri:noRegion></affiliation></author><author><name sortKey="Bergmann, Silke" sort="Bergmann, Silke" uniqKey="Bergmann S" first="Silke" last="Bergmann">Silke Bergmann</name></author><author><name sortKey="Krumbholz, Andi" sort="Krumbholz, Andi" uniqKey="Krumbholz A" first="Andi" last="Krumbholz">Andi Krumbholz</name></author><author><name sortKey="Wutzler, Peter" sort="Wutzler, Peter" uniqKey="Wutzler P" first="Peter" last="Wutzler">Peter Wutzler</name></author><author><name sortKey="Durrwald, Ralf" sort="Durrwald, Ralf" uniqKey="Durrwald R" first="Ralf" last="Dürrwald">Ralf Dürrwald</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2008">2008</date><idno type="RBID">pubmed:18985274</idno><idno type="pmid">18985274</idno><idno type="doi">10.1007/s00705-008-0244-1</idno><idno type="wicri:Area/Main/Corpus">000433</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000433</idno><idno type="wicri:Area/Main/Curation">000433</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000433</idno><idno type="wicri:Area/Main/Exploration">000433</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Ongoing evolution of swine influenza viruses: a novel reassortant.</title><author><name sortKey="Zell, Roland" sort="Zell, Roland" uniqKey="Zell R" first="Roland" last="Zell">Roland Zell</name><affiliation wicri:level="1"><nlm:affiliation>Institut für Virologie und Antivirale Therapie, Universitätsklinikum, Friedrich Schiller Universität, Hans-Knöll-Str. 2, 07745, Jena, Germany. Roland.Zell@med.uni-jena.de</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institut für Virologie und Antivirale Therapie, Universitätsklinikum, Friedrich Schiller Universität, Hans-Knöll-Str. 2, 07745, Jena</wicri:regionArea><wicri:noRegion>07745, Jena</wicri:noRegion><wicri:noRegion>07745, Jena</wicri:noRegion><wicri:noRegion>Jena</wicri:noRegion></affiliation></author><author><name sortKey="Bergmann, Silke" sort="Bergmann, Silke" uniqKey="Bergmann S" first="Silke" last="Bergmann">Silke Bergmann</name></author><author><name sortKey="Krumbholz, Andi" sort="Krumbholz, Andi" uniqKey="Krumbholz A" first="Andi" last="Krumbholz">Andi Krumbholz</name></author><author><name sortKey="Wutzler, Peter" sort="Wutzler, Peter" uniqKey="Wutzler P" first="Peter" last="Wutzler">Peter Wutzler</name></author><author><name sortKey="Durrwald, Ralf" sort="Durrwald, Ralf" uniqKey="Durrwald R" first="Ralf" last="Dürrwald">Ralf Dürrwald</name></author></analytic><series><title level="j">Archives of virology</title><idno type="eISSN">1432-8798</idno><imprint><date when="2008" type="published">2008</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals (MeSH)</term><term>Antibodies, Viral (blood)</term><term>Evolution, Molecular (MeSH)</term><term>Germany (MeSH)</term><term>Hemagglutination Inhibition Tests (MeSH)</term><term>Influenza A Virus, H3N2 Subtype (classification)</term><term>Influenza A Virus, H3N2 Subtype (genetics)</term><term>Influenza A Virus, H3N2 Subtype (immunology)</term><term>Influenza A Virus, H3N2 Subtype (isolation & purification)</term><term>Molecular Sequence Data (MeSH)</term><term>Orthomyxoviridae Infections (immunology)</term><term>Orthomyxoviridae Infections (veterinary)</term><term>Orthomyxoviridae Infections (virology)</term><term>Phylogeny (MeSH)</term><term>Reassortant Viruses (classification)</term><term>Reassortant Viruses (genetics)</term><term>Reassortant Viruses (immunology)</term><term>Reassortant Viruses (isolation & purification)</term><term>Swine (MeSH)</term><term>Swine Diseases (virology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Allemagne (MeSH)</term><term>Animaux (MeSH)</term><term>Anticorps antiviraux (sang)</term><term>Données de séquences moléculaires (MeSH)</term><term>Infections à Orthomyxoviridae (immunologie)</term><term>Infections à Orthomyxoviridae (médecine vétérinaire)</term><term>Infections à Orthomyxoviridae (virologie)</term><term>Maladies des porcs (virologie)</term><term>Phylogenèse (MeSH)</term><term>Sous-type H3N2 du virus de la grippe A (classification)</term><term>Sous-type H3N2 du virus de la grippe A (génétique)</term><term>Sous-type H3N2 du virus de la grippe A (immunologie)</term><term>Sous-type H3N2 du virus de la grippe A (isolement et purification)</term><term>Suidae (MeSH)</term><term>Tests d'inhibition de l'hémagglutination (MeSH)</term><term>Virus recombinants (classification)</term><term>Virus recombinants (génétique)</term><term>Virus recombinants (immunologie)</term><term>Virus recombinants (isolement et purification)</term><term>Évolution moléculaire (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="blood" xml:lang="en"><term>Antibodies, Viral</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Germany</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Influenza A Virus, H3N2 Subtype</term><term>Reassortant Viruses</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Influenza A Virus, H3N2 Subtype</term><term>Reassortant Viruses</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Sous-type H3N2 du virus de la grippe A</term><term>Virus recombinants</term></keywords><keywords scheme="MESH" qualifier="immunologie" xml:lang="fr"><term>Infections à Orthomyxoviridae</term><term>Sous-type H3N2 du virus de la grippe A</term><term>Virus recombinants</term></keywords><keywords scheme="MESH" qualifier="immunology" xml:lang="en"><term>Influenza A Virus, H3N2 Subtype</term><term>Orthomyxoviridae Infections</term><term>Reassortant Viruses</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Influenza A Virus, H3N2 Subtype</term><term>Reassortant Viruses</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Sous-type H3N2 du virus de la grippe A</term><term>Virus recombinants</term></keywords><keywords scheme="MESH" qualifier="médecine vétérinaire" xml:lang="fr"><term>Infections à Orthomyxoviridae</term></keywords><keywords scheme="MESH" qualifier="sang" xml:lang="fr"><term>Anticorps antiviraux</term><term>Sous-type H3N2 du virus de la grippe A</term><term>Virus recombinants</term></keywords><keywords scheme="MESH" qualifier="veterinary" xml:lang="en"><term>Orthomyxoviridae Infections</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Infections à Orthomyxoviridae</term><term>Maladies des porcs</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Orthomyxoviridae Infections</term><term>Swine Diseases</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Evolution, Molecular</term><term>Hemagglutination Inhibition Tests</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Swine</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Allemagne</term><term>Animaux</term><term>Données de séquences moléculaires</term><term>Phylogenèse</term><term>Suidae</term><term>Tests d'inhibition de l'hémagglutination</term><term>Évolution moléculaire</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Allemagne</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A novel H3N2 influenza virus strain isolated in Germany from pigs with clinical symptoms of influenza is described. It was characterised by neutralisation test, hemagglutination inhibition test and complete sequencing of the genome. The data demonstrate the emergence of a H3N2 reassortant with the human-like HAH3 gene of prevalent European porcine H3N2 influenza viruses and a NAN2 gene of the European porcine H1N2 viruses. The gene segments of the internal proteins are avian-like, consistent with European porcine influenza viruses. Analysis of GenBank sequence data reveals numerous reassortment events in recent years, demonstrating ongoing evolution of swine influenza viruses.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">18985274</PMID><DateCompleted><Year>2008</Year><Month>12</Month><Day>02</Day></DateCompleted><DateRevised><Year>2008</Year><Month>11</Month><Day>12</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-8798</ISSN><JournalIssue CitedMedium="Internet"><Volume>153</Volume><Issue>11</Issue><PubDate><Year>2008</Year></PubDate></JournalIssue><Title>Archives of virology</Title><ISOAbbreviation>Arch. Virol.</ISOAbbreviation></Journal><ArticleTitle>Ongoing evolution of swine influenza viruses: a novel reassortant.</ArticleTitle><Pagination><MedlinePgn>2085-92</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00705-008-0244-1</ELocationID><Abstract><AbstractText>A novel H3N2 influenza virus strain isolated in Germany from pigs with clinical symptoms of influenza is described. It was characterised by neutralisation test, hemagglutination inhibition test and complete sequencing of the genome. The data demonstrate the emergence of a H3N2 reassortant with the human-like HAH3 gene of prevalent European porcine H3N2 influenza viruses and a NAN2 gene of the European porcine H1N2 viruses. The gene segments of the internal proteins are avian-like, consistent with European porcine influenza viruses. Analysis of GenBank sequence data reveals numerous reassortment events in recent years, demonstrating ongoing evolution of swine influenza viruses.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zell</LastName><ForeName>Roland</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Institut für Virologie und Antivirale Therapie, Universitätsklinikum, Friedrich Schiller Universität, Hans-Knöll-Str. 2, 07745, Jena, Germany. Roland.Zell@med.uni-jena.de</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bergmann</LastName><ForeName>Silke</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Krumbholz</LastName><ForeName>Andi</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Wutzler</LastName><ForeName>Peter</ForeName><Initials>P</Initials></Author><Author ValidYN="Y"><LastName>Dürrwald</LastName><ForeName>Ralf</ForeName><Initials>R</Initials></Author></AuthorList><Language>eng</Language><DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName><AccessionNumberList><AccessionNumber>EU478814</AccessionNumber><AccessionNumber>EU924268</AccessionNumber><AccessionNumber>EU924269</AccessionNumber><AccessionNumber>EU924270</AccessionNumber><AccessionNumber>EU924271</AccessionNumber><AccessionNumber>EU924272</AccessionNumber><AccessionNumber>EU924273</AccessionNumber><AccessionNumber>EU924274</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2008</Year><Month>11</Month><Day>06</Day></ArticleDate></Article><MedlineJournalInfo><Country>Austria</Country><MedlineTA>Arch Virol</MedlineTA><NlmUniqueID>7506870</NlmUniqueID><ISSNLinking>0304-8608</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D000914">Antibodies, Viral</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000914" MajorTopicYN="N">Antibodies, Viral</DescriptorName><QualifierName UI="Q000097" MajorTopicYN="N">blood</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D019143" MajorTopicYN="Y">Evolution, Molecular</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005858" MajorTopicYN="N" Type="Geographic">Germany</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006385" MajorTopicYN="N">Hemagglutination Inhibition Tests</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D053122" MajorTopicYN="N">Influenza A Virus, H3N2 Subtype</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000276" MajorTopicYN="N">immunology</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009976" MajorTopicYN="N">Orthomyxoviridae Infections</DescriptorName><QualifierName UI="Q000276" MajorTopicYN="N">immunology</QualifierName><QualifierName UI="Q000662" MajorTopicYN="Y">veterinary</QualifierName><QualifierName UI="Q000821" MajorTopicYN="N">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016865" MajorTopicYN="N">Reassortant Viruses</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000276" MajorTopicYN="N">immunology</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013552" MajorTopicYN="N">Swine</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013553" MajorTopicYN="N">Swine Diseases</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2008</Year><Month>08</Month><Day>05</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2008</Year><Month>10</Month><Day>10</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2008</Year><Month>11</Month><Day>6</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2008</Year><Month>12</Month><Day>17</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2008</Year><Month>11</Month><Day>6</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">18985274</ArticleId><ArticleId IdType="doi">10.1007/s00705-008-0244-1</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Allemagne</li></country></list><tree><noCountry><name sortKey="Bergmann, Silke" sort="Bergmann, Silke" uniqKey="Bergmann S" first="Silke" last="Bergmann">Silke Bergmann</name><name sortKey="Durrwald, Ralf" sort="Durrwald, Ralf" uniqKey="Durrwald R" first="Ralf" last="Dürrwald">Ralf Dürrwald</name><name sortKey="Krumbholz, Andi" sort="Krumbholz, Andi" uniqKey="Krumbholz A" first="Andi" last="Krumbholz">Andi Krumbholz</name><name sortKey="Wutzler, Peter" sort="Wutzler, Peter" uniqKey="Wutzler P" first="Peter" last="Wutzler">Peter Wutzler</name></noCountry><country name="Allemagne"><noRegion><name sortKey="Zell, Roland" sort="Zell, Roland" uniqKey="Zell R" first="Roland" last="Zell">Roland Zell</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/GrippeAllemagneV4/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000445 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000445 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Sante
|area= GrippeAllemagneV4
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:18985274
|texte= Ongoing evolution of swine influenza viruses: a novel reassortant.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:18985274" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a GrippeAllemagneV4
| This area was generated with Dilib version V0.6.35. |  |